USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: Q8WX93 USC-OGP 2-DE database:  Q8WX93 Q8WX93 General information about the entry View entry in simple text format Entry name PALLD_HUMAN Primary accession number Q8WX93 Secondary accession number(s) Q9Y2J6 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=Palladin; AltName: Full=SIH002; AltName: Full=Sarcoma antigen NY-SAR-77;. Gene name Name=PALLD Synonyms=KIAA0992 ORFNames=CGI-151 Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10} Homo sapiens (Human)   map experimental info   UVEAL_MELANOMA_3-10 MAP LOCATIONS: SPOT OGP-1114: pI=6.39; Mw=97714 SPOT OGP-1115: pI=6.47; Mw=97252 Cross-references UniProtKB/Swiss-Prot Q8WX93; PALLD_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name PALLD_HUMAN Primary accession number Q8WX93 Secondary accession number(s) B3KTG2 B5MD56 B7ZMM5 Q7L3E0 Q7Z3W0 Q86WE8 Q8N1M2 Q9UGA0 Q9UQF5 Q9Y2J6 Q9Y3E9 Sequence was last modified on  November 30, 2010 (version 3) Annotations were last modified on  March 15, 2017 (version 145) Name and origin of the protein Description RecName: Full=Palladin; AltName: Full=SIH002; AltName: Full=Sarcoma antigen NY-SAR-77; Gene name Name=PALLD Synonyms=KIAA0992 ORFNames=CGI-151 Encoded on Name=PALLD; Synonyms=KIAA0992; ORFNames=CGI-151 Keywords 3D-structure; Actin-binding; Alternative splicing; Cell junction; Cell projection; Complete proteome; Cytoplasm; Cytoskeleton; Disulfide bond; Immunoglobulin domain; Phosphoprotein; Polymorphism; Reference proteome; Repeat. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL AF077041; AAD27774.1; -; mRNA EMBL AF464873; AAL69964.1; -; mRNA EMBL AB023209; BAA76836.1; ALT_INIT; mRNA EMBL AF151909; AAD34146.1; ALT_INIT; mRNA EMBL AK095512; BAG53074.1; -; mRNA EMBL AK096458; BAC04796.1; ALT_INIT; mRNA EMBL AC079858; -; NOT_ANNOTATED_CDS; Genomic_DNA EMBL AC079926; -; NOT_ANNOTATED_CDS; Genomic_DNA EMBL AC080188; -; NOT_ANNOTATED_CDS; Genomic_DNA EMBL AC084353; -; NOT_ANNOTATED_CDS; Genomic_DNA EMBL AC115538; -; NOT_ANNOTATED_CDS; Genomic_DNA EMBL BC013867; AAH13867.2; -; mRNA EMBL BC144666; AAI44667.1; -; mRNA EMBL AY211921; AAO65174.1; ALT_FRAME; mRNA EMBL BX537391; CAD97633.1; -; mRNA CCDS CCDS34098.1; -. [Q8WX93-2]; . CCDS CCDS54818.1; -. [Q8WX93-9]; . CCDS CCDS54819.1; -. [Q8WX93-8]; . CCDS CCDS54820.1; -. [Q8WX93-4]; . PIR T13078; T13078; . RefSeq NP_001159580.1; NM_001166108.1. [Q8WX93-9]; . RefSeq NP_001159581.1; NM_001166109.1. [Q8WX93-8]; . RefSeq NP_001159582.1; NM_001166110.1. [Q8WX93-4]; . RefSeq NP_057165.3; NM_016081.3. [Q8WX93-2]; . UniGene Hs.151220; -; . PDB 2DM2; NMR; -; A=1000-1096 PDB 2DM3; NMR; -; A=1133-1229 PDBsum 2DM2; -; . PDBsum 2DM3; -; . ProteinModelPortal Q8WX93; -; . SMR Q8WX93; -; . BioGrid 116662; 46; . IntAct Q8WX93; 32; . STRING 9606.ENSP00000425556; -; . iPTMnet Q8WX93; -; . PhosphoSitePlus Q8WX93; -; . BioMuta PALLD; -; . DMDM 313104206; -; . EPD Q8WX93; -; . MaxQB Q8WX93; -; . PaxDb Q8WX93; -; . PeptideAtlas Q8WX93; -; . PRIDE Q8WX93; -; . Ensembl ENST00000261509; ENSP00000261509; ENSG00000129116. [Q8WX93-2]; . Ensembl ENST00000505667; ENSP00000425556; ENSG00000129116. [Q8WX93-9]; . Ensembl ENST00000507735; ENSP00000424016; ENSG00000129116. [Q8WX93-4]; . Ensembl ENST00000512127; ENSP00000426947; ENSG00000129116. [Q8WX93-8]; . GeneID 23022; -; . KEGG hsa:23022; -; . UCSC uc003iru.3; human. [Q8WX93-1]; . CTD 23022; -; . DisGeNET 23022; -; . GeneCards PALLD; -; . HGNC HGNC:17068; PALLD; . HPA HPA035905; -; . MalaCards PALLD; -; . MIM 606856; phenotype; . MIM 608092; gene; . neXtProt NX_Q8WX93; -; . OpenTargets ENSG00000129116; -; . PharmGKB PA142671205; -; . eggNOG ENOG410IGH0; Eukaryota; . eggNOG ENOG41103YT; LUCA; . GeneTree ENSGT00840000129779; -; . HOGENOM HOG000028074; -; . HOVERGEN HBG059166; -; . InParanoid Q8WX93; -; . OMA TPRVRWF; -; . OrthoDB EOG091G011D; -; . PhylomeDB Q8WX93; -; . TreeFam TF343193; -; . SIGNOR Q8WX93; -; . ChiTaRS PALLD; human; . EvolutionaryTrace Q8WX93; -; . GeneWiki Palladin; -; . GenomeRNAi 23022; -; . PRO PR:Q8WX93; -; . Proteomes UP000005640; Chromosome 4; . Bgee ENSG00000129116; -; . ExpressionAtlas Q8WX93; baseline and differential; . Genevisible Q8WX93; HS; . GO GO:0015629; C:actin cytoskeleton; IDA:HPA; . GO GO:0005884; C:actin filament; IDA:HGNC; . GO GO:0030424; C:axon; IEA:UniProtKB-SubCell; . GO GO:0005829; C:cytosol; IDA:HPA; . GO GO:0005925; C:focal adhesion; IDA:UniProtKB; . GO GO:0030426; C:growth cone; IEA:UniProtKB-SubCell; . GO GO:0030027; C:lamellipodium; IEA:UniProtKB-SubCell; . GO GO:0005634; C:nucleus; IDA:HGNC; . GO GO:0005886; C:plasma membrane; IDA:HPA; . GO GO:0002102; C:podosome; IEA:UniProtKB-SubCell; . GO GO:0001726; C:ruffle; IEA:UniProtKB-SubCell; . GO GO:0030018; C:Z disc; IEA:UniProtKB-SubCell; . GO GO:0051371; F:muscle alpha-actinin binding; TAS:HGNC; . GO GO:0030036; P:actin cytoskeleton organization; IEA:Ensembl; . GO GO:0016477; P:cell migration; IEA:InterPro; . GO GO:0007010; P:cytoskeleton organization; NAS:HGNC; . GO GO:0003382; P:epithelial cell morphogenesis; IEA:Ensembl; . GO GO:0003334; P:keratinocyte development; IEA:Ensembl; . CDD cd05893; Ig_Palladin_C; 1; . Gene3D 2.60.40.10; -; 6; . InterPro IPR007110; Ig-like_dom; . InterPro IPR013783; Ig-like_fold; . InterPro IPR013098; Ig_I-set; . InterPro IPR003599; Ig_sub; . InterPro IPR003598; Ig_sub2; . InterPro IPR033017; Palladin_C; . Pfam PF07679; I-set; 5; . SMART SM00409; IG; 5; . SMART SM00408; IGc2; 5; . SUPFAM SSF48726; SSF48726; 5; . PROSITE PS50835; IG_LIKE; 5; .

Gateways to other related servers

• The World-2DPAGE Constellation - Entry point to the world-wide 2-DPAGE resources.
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• World-2DPAGE Portal - A dynamic portal to query simultaneously world-wide gel-based proteomics databases.
• SWISS-2DPAGE - The Geneva Two-dimensional polyacrylamide gel electrophoresis database.
• ExPASy - The resources web server of the Swiss Institute of Bioinformatics

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